Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928368.1_cds_XP_016475936.1_67821
CDS Infomation

[gene=LOC107797548] [db_xref=GeneID:107797548] [protein=protein RETICULATA-RELATED 1, chloroplastic-like] [protein_id=XP_016475936.1] [location=join(2817..3179,4503..4667,4753..4845,4921..5036,12985..13083,13176..13481,13605..13769,14271..14550)] [gbkey=CDS]
Sequence

ATGTCTCACTCAGTGTTTCAAACAGCTCAATTCATGCCCATAAATACCCAAATTGTCCCT
ACCTCCAAACCCTTATTTCCCGCCGTAGTTATCCGTCGACCAGCTCCAGTGGTCGCCGGG
AAGCTCCGTCAAACTAACGTTATCAAGGCGTCCACTGCTCCAGCGATTGACGGAGACGCT
ATTGACGGTTTGGAGCGGTGCTTTCAAGCGTCACCGTCGATTGATTCTCCGTCACCGTCG
TCATCCTCTTCGGTAATGTACGCTCCGGTAATGAAAGGGGGAAAATACGGTGCTTTAGGT
GCAGTTACATTGGAAAAATCGAAGCTTGATTTGACCCAGAAACAGACCAAGTCTAGCCCC
GAGCTTTCGACTGGTGGAGGAGGTGGAAATATGGGAAAGAATTTAAATCATGGTGGTGGT
GATGGAGGTGACGATAATGGTGATGATGATGATTACTTTGATGACTTTGATGATGGTGAT
GAGGGAGATGAGGGTGGACTATTTAGGAGAAGAATGATACTCCAAGAGTTATTTGATCGG
AAATTTGTTGATGCCGTGCTAAATGAGTGGCAGAAGACAATGATGGATTTACCAGCTGGG
TTTCGGCAAGCCTATGAAATGGGCTTAGTTAGCTCTGCCCAAATGGTGAAGTTTCTTGCC
ATTAATGCAAGGCCGACAACAGCTAGATTTATTTCCCGGTCACTTCCTCAAGGATTATCA
AGGGCATTCATTGGCAGGAAGATTGCAGATCCGGCATTTTTGTACAAGCTGCTTCTAGAG
CAGGCCAGTACAATTGGTTGTTCAGTTTGGTGGGAGATCAAAAACCGTAAGGAGAGGATA
AAGCATGAGTGGGATCTTGCCCTTCTTAATGTGCTTACTGTAACGGCTTGCAATGCTATT
GTTGTTTGGTCGCTTGCTCCTTGTCGCTCATATGGAAACACATTCCACTTTGATTTGCAA
AACACGATACAGAAGCTTCCAAACAATATCTTTGAAAAGAGTTATCCACTAAGAGAATTT
GACTTGCAGAAGAGAATTCATTCCTTTTTCTATAAGTCTGCAGAGTTCTGTATGGTTGGA
CTCACTGCGGGAGCTGTCCAAGGGGCTCTATCAAACCTTGTTGCCACTAAAAAGGAGGGA
AGGTTGTCAGTGACTATCCCATCTGTGAGCAGTAATGCACTTGGTTATGGTGCCTTTCTT
GGTCTTTATGCGAACCTTCGTTATCAGCTCTTATGTGGATTTGACAGAGCTGTAGTTAAC
CACTTTGATGTTATTGGAGTGGCTCTCTTCTTCAGCACTGCCCTGAGGGTTTTGAATGTT
CAAGTTGGAGAGACATCAAGACTAGCTTGGCTTGGTGTGGAGGTGGATCCCTTGGCCCAT
TCAGACGACATCTTGAAGGCTTATAGTCGACCCACAGAGGGTCTTGAACAGCCTTCTTCA
AAATGGTTGATATCTAAGAATGCCATAGTTTCCGGGCTTGGCCTTCTTGGGATCAAACAG
GGTCAGACTGACTCGGCTTCTGAGGGTGAAACAGCAGCTCCTAAGGCTCGGAGAAAAAGA
ATTGTCAAGAAAAAAGTAACAAGTTGA

Peptide Sequence

PEP ID

XP_016475936.1
PEP Infomation

PREDICTED: protein RETICULATA-RELATED 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MSHSVFQTAQFMPINTQIVPTSKPLFPAVVIRRPAPVVAGKLRQTNVIKASTAPAIDGDA
IDGLERCFQASPSIDSPSPSSSSSVMYAPVMKGGKYGALGAVTLEKSKLDLTQKQTKSSP
ELSTGGGGGNMGKNLNHGGGDGGDDNGDDDDYFDDFDDGDEGDEGGLFRRRMILQELFDR
KFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTARFISRSLPQGLS
RAFIGRKIADPAFLYKLLLEQASTIGCSVWWEIKNRKERIKHEWDLALLNVLTVTACNAI
VVWSLAPCRSYGNTFHFDLQNTIQKLPNNIFEKSYPLREFDLQKRIHSFFYKSAEFCMVG
LTAGAVQGALSNLVATKKEGRLSVTIPSVSSNALGYGAFLGLYANLRYQLLCGFDRAVVN
HFDVIGVALFFSTALRVLNVQVGETSRLAWLGVEVDPLAHSDDILKAYSRPTEGLEQPSS
KWLISKNAIVSGLGLLGIKQGQTDSASEGETAAPKARRKRIVKKKVTS

Transcript Sequence

Gene sequence data has not been registered.